Transcript: LINC00543:6

Basic information

LNCipedia transcript ID: LINC00543:6 
LNCipedia gene ID: LINC00543
Location (hg19): chr13:28527663-28529507
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1845 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260704.1|ENST00000567234.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.83 non-coding 
CPAT coding probability 67.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00543:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ATP5EP2-1:2
5.0 lnc-ATP5EP2-1:2
5.1 LINC00543:3
5.2 LINC00543:6