Transcript: LINC00545:1

Basic information

LNCipedia transcript ID: LINC00545:1 
LNCipedia gene ID: LINC00545
Location (hg19): chr13:31455103-31457433
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 423 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021746; NONHSAT032811
Alternative gene names: XLOC_010338; linc-C13orf33-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -219.8009 non-coding 
CPAT coding probability 3.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00545:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C13orf33-1:1
3.1 lnc-C13orf33-1:1
4.0 LINC00545:1
4.1 LINC00545:1
5.0 LINC00545:1
5.1 LINC00545:1
5.2 LINC00545:1