Transcript: LINC00545:5

Basic information

LNCipedia transcript ID: LINC00545:5 
LNCipedia gene ID: LINC00545
Location (hg19): chr13:31444934-31457539
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1898 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236094.1|ENCT00000111351.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -57.5648 non-coding 
CPAT coding probability 22.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00545:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00545:5
5.0 LINC00545:5
5.1 LINC00545:5
5.2 LINC00545:5