Transcript: LINC00547:3

Basic information

LNCipedia transcript ID: LINC00547:3 
LNCipedia gene ID: LINC00547
Location (hg19): chr13:38108538-38123510
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1172 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014417.1|MICT00000093085.1
Alternative gene names: FLJ34747


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.9032 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00547:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00547:3
5.0 LINC00547:3
5.1 LINC00547:3
5.2 LINC00547:3