Transcript: LINC00566:4

Basic information

LNCipedia transcript ID: LINC00566:4 
LNCipedia gene ID: LINC00566
Location (hg19): chr13:24905588-24911256
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 567 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00021481
Alternative gene names: XLOC_010315; linc-ATP12A-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.4444 non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00566:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1QTNF9-1:1
3.1 lnc-C1QTNF9-1:2
4.0 lnc-C1QTNF9-1:2
4.1 lnc-C1QTNF9-1:2
5.0 lnc-C1QTNF9-1:2
5.1 LINC00566:2
5.2 LINC00566:4