Transcript: LINC00589:16

Basic information

LNCipedia transcript ID: LINC00589:16 
LNCipedia gene ID: LINC00589
Location (hg19): chr8:29525002-29605640
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1285 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251191.3|MICT00000341255.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.9709 non-coding 
CPAT coding probability 2.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00589:16 no no no no

Available literature

  1. Zhang (2018), Long noncoding RNA TSLNC8 is a tumor suppressor that inactivates the interleukin-6/STAT3 signaling pathway., Hepatology


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00589:16
5.0 LINC00589:16
5.1 LINC00589:16
5.2 LINC00589:16