Transcript: LINC00601:2

Basic information

LNCipedia transcript ID: LINC00601:2 
LNCipedia gene ID: LINC00601
Location (hg19): chr10:128105415-128110448
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 262 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235180.1|FTMT23700026336.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -135.2053 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00601:2 no no no no

Available literature

  1. Guo (2014), Integrated analysis of long noncoding RNAs and mRNAs reveals their potential roles in the pathogenesis of uterine leiomyomas., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00601:2
5.0 LINC00601:2
5.1 LINC00601:2
5.2 LINC00601:2