Transcript: LINC00608:6

Basic information

LNCipedia transcript ID: LINC00608:6 
LNCipedia gene ID: LINC00608
Location (hg19): chr2:219840911-219844350
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3330 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005020; NONHSAT076967
Alternative gene names: XLOC_001866; linc-FAM134A;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.0689 non-coding 
CPAT coding probability 10.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00608:6 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDK5R2-1:3
3.1 lnc-CDK5R2-1:3
4.0 LINC00608:6
4.1 LINC00608:6
5.0 LINC00608:6
5.1 LINC00608:6
5.2 LINC00608:6