Transcript: LINC00636:6

Basic information

LNCipedia transcript ID: LINC00636:6 
LNCipedia gene ID: LINC00636
RefSeq ID: NR_015394
Location (hg19): chr3:107602052-107647754
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1307 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_015394.1
Alternative gene names: LINC00636


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.9073 non-coding 
CPAT coding probability 19.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00636:6 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00636:6
5.1 LINC00636:6
5.2 LINC00636:6