Transcript: LINC00639:2

Basic information

LNCipedia transcript ID: LINC00639:2 
HGNC Gene Symbol: LINC00639    
HGNC Full Gene Name: long intergenic non-protein coding RNA 639
Ensembl Gene ID: ENSG00000259070
Ensembl Transcript ID: ENST00000553932
Location (hg19): chr14:39218543-39417477
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4496 bp
Exons: 7
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553932.5
Alternative gene names: ENSG00000259070.5; LINC00639;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 102.2103 coding 
CPAT coding probability 49.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00639:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00639:2
4.1 LINC00639:2
5.0 LINC00639:2
5.1 LINC00639:2
5.2 LINC00639:2