Transcript: LINC00639:6

Basic information

LNCipedia transcript ID: LINC00639:6 
LNCipedia gene ID: LINC00639
RefSeq ID: NR_039982
Location (hg19): chr14:39218543-39386086
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4306 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT140161; NR_039982; NR_039982.1
Alternative gene names: ; LINC00639


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 102.2103 coding 
CPAT coding probability 49.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00639:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEC23A-1:6
4.0 LINC00639:6
4.1 LINC00639:6
5.0 LINC00639:6
5.1 LINC00639:6
5.2 LINC00639:6