Transcript: LINC00644:1

Basic information

LNCipedia transcript ID: LINC00644:1 
HGNC Gene Symbol: LINC00644    
HGNC Full Gene Name: long intergenic non-protein coding RNA 644
Ensembl Gene ID: ENSG00000259142
Ensembl Transcript ID: ENST00000555156
RefSeq ID: NR_104063
Location (hg19): chr14:62600867-62606691
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 295 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000555156; ENST00000555156.1; RP11-355I22.4-001; OTTHUMT00000411767.1; NONHSAT037291; NR_104063.1
Alternative gene names: ENSG00000259142; RP11-355I22.4; ENSG00000259142.1; OTTHUMG00000171117.1; LINC00644;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.7382 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00644:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KCNH5-2:1
3.1 lnc-KCNH5-2:1
4.0 LINC00644:1
4.1 LINC00644:1
5.0 LINC00644:1
5.1 LINC00644:1
5.2 LINC00644:1