Transcript: LINC00648:1

Basic information

LNCipedia transcript ID: LINC00648:1 
LNCipedia gene ID: LINC00648
Location (hg19): chr14:48234154-48324020
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2081 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA411:5
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.9382 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00648:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00648:1
4.1 LINC00648:1
5.0 LINC00648:1
5.1 LINC00648:1
5.2 LINC00648:1