Transcript: LINC00658:7

Basic information

LNCipedia transcript ID: LINC00658:7 
LNCipedia gene ID: LINC00658
RefSeq ID: NR_038239
Location (hg19): chr20:5412603-5426394
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1639 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT078322; NR_038239; NR_038239.1
Alternative gene names: ; LINC00658


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.9562 non-coding 
CPAT coding probability 14.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00658:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPCPD1-2:9
4.0 LINC00658:7
4.1 LINC00658:7
5.0 LINC00658:7
5.1 LINC00658:7
5.2 LINC00658:7