Transcript: LINC00663:5

Basic information

LNCipedia transcript ID: LINC00663:5 
LNCipedia gene ID: LINC00663
Location (hg19): chr19:19867181-19887222
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2371 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT063579; NR_026956
Alternative gene names: MGC39821


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 58.0306 non-coding 
CPAT coding probability 63.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00663:5 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF506-1:9
4.0 LINC00663:5
4.1 LINC00663:5
5.0 LINC00663:5
5.1 LINC00663:5
5.2 LINC00663:5