Transcript: LINC00678:1

Basic information

LNCipedia transcript ID: LINC00678:1 
LNCipedia gene ID: LINC00678
Location (hg19): chr11:27620891-27656267
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4916 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT018512
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3554 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00678:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BDNF-1:6
4.0 LINC00678:1
4.1 LINC00678:1
5.0 LINC00678:1
5.1 LINC00678:1
5.2 LINC00678:1