Transcript: LINC00682:2

Basic information

LNCipedia transcript ID: LINC00682:2 
LNCipedia gene ID: LINC00682
Location (hg19): chr4:41881539-41884628
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1424 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_104143
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.638 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00682:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PHOX2B-2:7
4.0 LINC00682:2
4.1 LINC00682:2
5.0 LINC00682:2
5.1 LINC00682:2
5.2 LINC00682:2