Transcript: LINC00692:11

Basic information

LNCipedia transcript ID: LINC00692:11 
LNCipedia gene ID: LINC00692
Location (hg19): chr3:25904460-25905439
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 749 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007130; NONHSAT088731
Alternative gene names: XLOC_003069; linc-NGLY1-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.6274 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00692:11 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NGLY1-1:8
3.1 lnc-NGLY1-1:8
4.0 LINC00692:11
4.1 LINC00692:11
5.0 LINC00692:11
5.1 LINC00692:11
5.2 LINC00692:11