Transcript: LINC00692:6

Basic information

LNCipedia transcript ID: LINC00692:6 
LNCipedia gene ID: LINC00692
Location (hg19): chr3:25900024-25915186
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 929 bp
Exons: 8
Sources: Broad Institute
Alternative transcript names: TCONS_00005394
Alternative gene names: XLOC_003069; linc-NGLY1-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.3899 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00692:6 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NGLY1-1:4
3.1 lnc-NGLY1-1:4
4.0 LINC00692:6
4.1 LINC00692:6
5.0 LINC00692:6
5.1 LINC00692:6
5.2 LINC00692:6