Transcript: LINC00701:1

Basic information

LNCipedia transcript ID: LINC00701:1 
HGNC Gene Symbol: LINC00701    
HGNC Full Gene Name: long intergenic non-protein coding RNA 701
Ensembl Gene ID: ENSG00000234556
Ensembl Transcript ID: ENST00000418295
Location (hg19): chr10:2347277-2357269
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 742 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00017898; ENST00000418295; ENST00000418295.1; RP11-311B18.1-001; OTTHUMT00000046441.1
Alternative gene names: XLOC_008687; linc-ADARB2-4; ENSG00000234556; RP11-311B18.1; ENSG00000234556.1; OTTHUMG00000017548.1; LINC00701;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.6178 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00701:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ADARB2-5:1
3.1 lnc-ADARB2-5:1
4.0 LINC00701:1
4.1 LINC00701:1
5.0 LINC00701:1
5.1 LINC00701:1
5.2 LINC00701:1