Transcript: LINC00710:5

Basic information

LNCipedia transcript ID: LINC00710:5 
HGNC Gene Symbol: LINC00710    
HGNC Full Gene Name: long intergenic non-protein coding RNA 710
Ensembl Gene ID: ENSG00000229240
Ensembl Transcript ID: ENST00000598573
Location (hg19): chr10:10989127-10994129
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 666 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT011390; ENST00000598573.1
Alternative gene names: ENSG00000229240.3; LINC00710; ENSG00000229240.8;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.0803 non-coding 
CPAT coding probability 6.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00710:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf31-6:10
4.0 LINC00710:5
4.1 LINC00710:5
5.0 LINC00710:5
5.1 LINC00710:5
5.2 LINC00710:5