Transcript: LINC00836:5

Basic information

LNCipedia transcript ID: LINC00836:5 
LNCipedia gene ID: LINC00836
Location (hg19): chr10:25940662-25975337
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 399 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018686; NONHSAT011810
Alternative gene names: XLOC_008416; linc-MYO3A-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.8615 non-coding 
CPAT coding probability 5.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00836:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPR158-2:1
3.1 lnc-GPR158-2:1
4.0 LINC00836:5
4.1 LINC00836:5
5.0 LINC00836:5
5.1 LINC00836:5
5.2 LINC00836:5