Transcript: LINC00845:1

Basic information

LNCipedia transcript ID: LINC00845:1 
LNCipedia gene ID: LINC00845
Location (hg19): chr10:62732875-62786178
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 663 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000441142; ENST00000441142.1; RP11-322C8.2-001; OTTHUMT00000048217.1; NONHSAT013557
Alternative gene names: ENSG00000227244; RP11-322C8.2; ENSG00000227244.1; OTTHUMG00000018291.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.8451 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00845:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDK1-1:1
3.1 lnc-CDK1-2:1
4.0 LINC00845:1
4.1 LINC00845:1
5.0 LINC00845:1
5.1 LINC00845:1
5.2 LINC00845:1