Transcript: LINC00847:1

Basic information

LNCipedia transcript ID: LINC00847:1 
LNCipedia gene ID: LINC00847
Location (hg19): chr5:180256956-180258618
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1422 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000545462
Alternative gene names: ENSG00000249705;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.5873 non-coding 
CPAT coding probability 3.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00847:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BTNL8-3:1
3.1 lnc-BTNL8-3:1
4.0 LINC00847:1
4.1 LINC00847:1
5.0 LINC00847:1
5.1 LINC00847:1
5.2 LINC00847:1