Transcript: LINC00864:3

Basic information

LNCipedia transcript ID: LINC00864:3 
LNCipedia gene ID: LINC00864
Location (hg19): chr10:89156819-89167457
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 707 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000429129; ENST00000429129.1; RP11-399L7.2-001; OTTHUMT00000049216.1
Alternative gene names: ENSG00000228055; RP11-399L7.2; ENSG00000228055.1; OTTHUMG00000018674.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.5103 non-coding 
CPAT coding probability 13.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00864:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLUD1-2:2
3.1 lnc-GLUD1-5:2
4.0 LINC00864:3
4.1 LINC00864:3
5.0 LINC00864:3
5.1 LINC00864:3
5.2 LINC00864:3