Transcript: LINC00882:35

Basic information

LNCipedia transcript ID: LINC00882:35 
LNCipedia gene ID: LINC00882
Location (hg19): chr3:107093687-107140188
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3594 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239828.2|HBMT00001007479.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.2512 non-coding 
CPAT coding probability 0.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:35 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00882:35
5.0 LINC00882:35
5.1 LINC00882:35
5.2 LINC00882:35