Transcript: LINC00882:44

Basic information

LNCipedia transcript ID: LINC00882:44 
LNCipedia gene ID: LINC00882
Location (hg19): chr3:106991477-107099497
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 448 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT091040; ENST00000599431.1
Alternative gene names: ENSG00000239828.2; RP11-446H18.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -369.6925 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:44 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD47-3:4
4.0 lnc-CD47-3:4
4.1 LINC00882:44
5.0 LINC00882:44
5.1 LINC00882:44
5.2 LINC00882:44