Transcript: LINC00882:66

Basic information

LNCipedia transcript ID: LINC00882:66 
LNCipedia gene ID: LINC00882
Location (hg19): chr3:106827308-106928347
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1775 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242759.2|HBMT00001007459.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -76.0701 non-coding 
CPAT coding probability 3.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:66 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00882:66
5.0 LINC00882:66
5.1 LINC00882:66
5.2 LINC00882:66