Transcript: LINC00882:8

Basic information

LNCipedia transcript ID: LINC00882:8 
HGNC Gene Symbol: LINC00882    
HGNC Full Gene Name: long intergenic non-protein coding RNA 882
Ensembl Gene ID: ENSG00000242759
Ensembl Transcript ID: ENST00000479612
Location (hg19): chr3:106830332-106959474
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 952 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000479612.2; ENST00000479612.6
Alternative gene names: ENSG00000242759.2; LINC00882; ENSG00000242759.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.606 non-coding 
CPAT coding probability 1.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:8 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLB-7:22
4.0 LINC00882:8
4.1 LINC00882:8
5.0 LINC00882:8
5.1 LINC00882:8
5.2 LINC00882:8