Transcript: LINC00892:7

Basic information

LNCipedia transcript ID: LINC00892:7 
LNCipedia gene ID: LINC00892
Location (hg19): chrX:135723028-135724508
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 252 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00017466
Alternative gene names: XLOC_008077; linc-CD40LG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -176.0789 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00892:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CD40LG-1:4
3.1 lnc-CD40LG-1:5
4.0 LINC00892:7
4.1 LINC00892:7
5.0 LINC00892:7
5.1 LINC00892:7
5.2 LINC00892:7