Transcript: LINC00894:19

Basic information

LNCipedia transcript ID: LINC00894:19 
LNCipedia gene ID: LINC00894
Location (hg19): chrX:149113524-149129065
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1958 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT138974
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.7962 non-coding 
CPAT coding probability 64.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00894:19 no no no no

Available literature

  1. Zhang (2018), Downregulation of LINC00894-002 Contributes to Tamoxifen Resistance by Enhancing the TGF-β Signaling Pathway., Biochemistry Mosc.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAGEA8-2:26
4.0 LINC00894:19
4.1 LINC00894:19
5.0 LINC00894:19
5.1 LINC00894:19
5.2 LINC00894:19