Transcript: LINC00905:11

Basic information

LNCipedia transcript ID: LINC00905:11 
HGNC Gene Symbol: LINC00905    
HGNC Full Gene Name: long intergenic non-protein coding RNA 905
Ensembl Gene ID: ENSG00000167459
Ensembl Transcript ID: ENST00000588838
Location (hg19): chr19:16144930-16152921
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1414 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000588838.2; ENST00000588838.6
Alternative gene names: ENSG00000167459.12; LINC00905; ENSG00000167459.16; FLJ25328


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.3736 non-coding 
CPAT coding probability 40.79% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00905:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004790.1-1:11
4.0 LINC00905:11
4.1 LINC00905:11
5.0 LINC00905:11
5.1 LINC00905:11
5.2 LINC00905:11