Transcript: LINC00909:16

Basic information

LNCipedia transcript ID: LINC00909:16 
LNCipedia gene ID: LINC00909
Location (hg19): chr18:72260385-72265071
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 791 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264247.1|ENST00000585279.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.673 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00909:16 no no no no

Available literature

  1. Liu (2017), CRISPRi-based genome-scale identification of functional long noncoding RNA loci in human cells., Science


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00909:16
5.0 LINC00909:16
5.1 LINC00909:16
5.2 LINC00909:16