Transcript: LINC00929:11

Basic information

LNCipedia transcript ID: LINC00929:11 
HGNC Gene Symbol: LINC00929    
HGNC Full Gene Name: long intergenic non-protein coding RNA 929
Ensembl Gene ID: ENSG00000259150
Ensembl Transcript ID: ENST00000553382
Location (hg19): chr15:26376819-26378172
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 220 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553382; ENST00000553382.1; RP11-1084I9.3-005; OTTHUMT00000414892.1; NONHSAT041177
Alternative gene names: ENSG00000259150; RP11-1084I9.3; ENSG00000259150.1; OTTHUMG00000171722.1; LINC00929; ENSG00000259150.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -298.32 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00929:11 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GABRA5-2:8
3.1 lnc-GABRA5-4:8
4.0 LINC00929:11
4.1 LINC00929:11
5.0 LINC00929:11
5.1 LINC00929:11
5.2 LINC00929:11