Transcript: LINC00938:2

Basic information

LNCipedia transcript ID: LINC00938:2 
HGNC Gene Symbol: LINC00938    
HGNC Full Gene Name: long intergenic non-protein coding RNA 938
RefSeq ID: NR_028408
Location (hg19): chr12:46119503-46121704
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2202 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT027832; NR_028408; NR_028408.1
Alternative gene names: ; LINC00938


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.4885 non-coding 
CPAT coding probability 27.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00938:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCAF11-6:1
4.0 LINC00938:2
4.1 LINC00938:2
5.0 LINC00938:2
5.1 LINC00938:2
5.2 LINC00938:2