Transcript: LINC00944:4

Basic information

LNCipedia transcript ID: LINC00944:4 
LNCipedia gene ID: LINC00944
RefSeq ID: NR_033878
Location (hg19): chr12:127215247-127256808
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 621 bp
Exons: 5
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00020177; NONHSAT031816; NR_033878; NR_033878.1
Alternative gene names: XLOC_010244; linc-DHX37-4; ; LINC00944


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.3356 non-coding 
CPAT coding probability 22.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00944:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DHX37-10:4
3.1 lnc-DHX37-10:4
4.0 LINC00944:4
4.1 LINC00944:4
5.0 LINC00944:4
5.1 LINC00944:4
5.2 LINC00944:4