Transcript: LINC00960:3

Basic information

LNCipedia transcript ID: LINC00960:3 
LNCipedia gene ID: LINC00960
RefSeq ID: NR_040005
Location (hg19): chr3:75721432-75728454
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1282 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_040005; NR_040005.1
Alternative gene names: ; LINC00960


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 63.1531 coding 
CPAT coding probability 13.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00960:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRG2C-1:5
4.0 LINC00960:3
4.1 LINC00960:3
5.0 LINC00960:3
5.1 LINC00960:3
5.2 LINC00960:3