Transcript: LINC00964:8

Basic information

LNCipedia transcript ID: LINC00964:8 
LNCipedia gene ID: LINC00964
Location (hg19): chr8:125953511-125963408
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 739 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015346; NONHSAT128921
Alternative gene names: XLOC_006916; linc-ZNF572;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.832 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00964:8 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF572-1:8
3.1 lnc-ZNF572-1:8
4.0 LINC00964:8
4.1 LINC00964:8
5.0 LINC00964:8
5.1 LINC00964:8
5.2 LINC00964:8