Transcript: LINC00992:7

Basic information

LNCipedia transcript ID: LINC00992:7 
HGNC Gene Symbol: LINC00992    
HGNC Full Gene Name: long intergenic non-protein coding RNA 992
Ensembl Gene ID: ENSG00000248663
Ensembl Transcript ID: ENST00000504107
Location (hg19): chr5:116790959-116815063
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 617 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000504107; ENST00000504107.1; CTC-504A5.1-003; OTTHUMT00000370940.1; NONHSAT103388
Alternative gene names: ENSG00000248663; CTC-504A5.1; ENSG00000248663.2; OTTHUMG00000162885.1; LINC00992; ENSG00000248663.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.9053 non-coding 
CPAT coding probability 6.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00992:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COMMD10-4:2
3.1 lnc-COMMD10-5:2
4.0 LINC00992:7
4.1 LINC00992:7
5.0 LINC00992:7
5.1 LINC00992:7
5.2 LINC00992:7