Transcript: LINC00999:10

Basic information

LNCipedia transcript ID: LINC00999:10 
LNCipedia gene ID: LINC00999
Location (hg19): chr10:38734347-38738964
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2469 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00018171
Alternative gene names: XLOC_008461; linc-BMS1-4; FLJ44672


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 76.8339 coding 
CPAT coding probability 70.77% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00999:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF37A-3:6
3.1 lnc-ZNF37A-3:8
4.0 LINC00999:10
4.1 LINC00999:10
5.0 LINC00999:10
5.1 LINC00999:10
5.2 LINC00999:10