Transcript: LINC01000:1

Basic information

LNCipedia transcript ID: LINC01000:1 
LNCipedia gene ID: LINC01000
Location (hg19): chr7:128273069-128281168
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2432 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014209; NONHSAT123215
Alternative gene names: XLOC_006242; linc-FAM71F2-1; FLJ45340


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.2424 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01000:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM71F2-1:1
3.1 lnc-FAM71F2-1:1
4.0 LINC01000:1
4.1 LINC01000:1
5.0 LINC01000:1
5.1 LINC01000:1
5.2 LINC01000:1