Transcript: LINC01000:4

Basic information

LNCipedia transcript ID: LINC01000:4 
LNCipedia gene ID: LINC01000
Location (hg19): chr7:128278644-128289065
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3414 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT123217; FPKM1_group_30360_transcript_6
Alternative gene names: FLJ45340


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.2424 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01000:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM71F2-1:3
4.0 LINC01000:4
4.1 LINC01000:4
5.0 LINC01000:4
5.1 LINC01000:4
5.2 LINC01000:4