Transcript: LINC01002:19

Basic information

LNCipedia transcript ID: LINC01002:19 
HGNC Gene Symbol: LINC01002    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1002
Ensembl Gene ID: ENSG00000282508
Ensembl Transcript ID: ENST00000633363
Location (hg19): chr19:203962-209316
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 541 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000633363.1
Alternative gene names: ENSG00000282508.1; LINC01002;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 37.1005 non-coding 
CPAT coding probability 13.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01002:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01002:19
4.1 LINC01002:19
5.0 LINC01002:19
5.1 LINC01002:19
5.2 LINC01002:19