Transcript: LINC01011:2

Basic information

LNCipedia transcript ID: LINC01011:2 
HGNC Gene Symbol: LINC01011    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1011
Ensembl Gene ID: ENSG00000244041
Ensembl Transcript ID: ENST00000450238
Location (hg19): chr6:2988201-2990582
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 886 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000450238.1; RP1-90J20.7-003; OTTHUMT00000255316.2; NONHSAT106902; ENST00000450238.5
Alternative gene names: ENSG00000244041.1; RP1-90J20.7; OTTHUMG00000014128.3; ENSG00000244041.3; LINC01011; ENSG00000244041.7; DKFZp686I15217


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0073 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01011:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NQO2-1:2
4.0 LINC01011:2
4.1 LINC01011:2
5.0 LINC01011:2
5.1 LINC01011:2
5.2 LINC01011:2