Transcript: LINC01011:5

Basic information

LNCipedia transcript ID: LINC01011:5 
HGNC Gene Symbol: LINC01011    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1011
Ensembl Gene ID: ENSG00000244041
Ensembl Transcript ID: ENST00000445000
Location (hg19): chr6:2988201-2991407
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2811 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445000.2
Alternative gene names: ENSG00000244041.7; LINC01011; DKFZp686I15217


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.0073 non-coding 
CPAT coding probability 41.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01011:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01011:5
4.1 LINC01011:5
5.0 LINC01011:5
5.1 LINC01011:5
5.2 LINC01011:5