Transcript: LINC01022:3

Basic information

LNCipedia transcript ID: LINC01022:3 
HGNC Gene Symbol: LINC01022    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1022
Ensembl Gene ID: ENSG00000232715
Ensembl Transcript ID: ENST00000415652
Location (hg19): chr7:158383321-158383812
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 394 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013107; ENST00000415652.1; AC093662.5-001; OTTHUMT00000327123.1
Alternative gene names: XLOC_006317; linc-WDR60-2; ENSG00000232715.1; AC093662.5; OTTHUMG00000152648.1; LINC01022; TCONS_00013107


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -463.1043 non-coding 
CPAT coding probability 5.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01022:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR60-6:2
3.1 lnc-WDR60-6:2
4.0 LINC01022:3
4.1 LINC01022:3
5.0 LINC01022:3
5.1 LINC01022:3
5.2 LINC01022:3