Transcript: LINC01030:4

Basic information

LNCipedia transcript ID: LINC01030:4 
HGNC Gene Symbol: LINC01030    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1030
Ensembl Gene ID: ENSG00000253799
Ensembl Transcript ID: ENST00000517505
Location (hg19): chr8:91605032-91618293
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 738 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000517505.1; AB015752.4-001; OTTHUMT00000376591.1
Alternative gene names: ENSG00000253799.1; AB015752.4; OTTHUMG00000163970.1; LINC01030; TCONS_00015085


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.8496 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01030:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM64-1:4
4.0 LINC01030:4
4.1 LINC01030:4
5.0 LINC01030:4
5.1 LINC01030:4
5.2 LINC01030:4