Transcript: LINC01033:1

Basic information

LNCipedia transcript ID: LINC01033:1 
LNCipedia gene ID: LINC01033
Location (hg19): chr5:53616774-53710957
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 717 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000523194.1; RP11-461C13.1-003; OTTHUMT00000381043.1; NONHSAT101444
Alternative gene names: ENSG00000249069.2; RP11-461C13.1; OTTHUMG00000162286.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.415 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01033:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSPB3-1:1
4.0 LINC01033:1
4.1 LINC01033:1
5.0 LINC01033:1
5.1 LINC01033:1
5.2 LINC01033:1