Transcript: LINC01035:1

Basic information

LNCipedia transcript ID: LINC01035:1 
HGNC Gene Symbol: LINC01035    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1035
Ensembl Gene ID: ENSG00000226486
Ensembl Transcript ID: ENST00000445072
Location (hg19): chr1:188874819-189006393
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 784 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000445072; ENST00000445072.1; RP11-373J16.1-001; OTTHUMT00000086291.1; NONHSAT008481
Alternative gene names: ENSG00000226486; RP11-373J16.1; ENSG00000226486.1; OTTHUMG00000035542.1; LINC01035;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.9964 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01035:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLA2G4A-5:1
3.1 lnc-PLA2G4A-6:1
4.0 LINC01035:1
4.1 LINC01035:1
5.0 LINC01035:1
5.1 LINC01035:1
5.2 LINC01035:1