Transcript: LINC01036:26

Basic information

LNCipedia transcript ID: LINC01036:26 
LNCipedia gene ID: LINC01036
Location (hg19): chr1:187412738-187439371
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 290 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: TCONS_00000351; ENST00000444887; ENST00000444887.1; RP11-445P19.1-001; OTTHUMT00000086169.1; NONHSAT008461
Alternative gene names: XLOC_000498; linc-RGS18-10; ENSG00000231599; RP11-445P19.1; ENSG00000231599.1; OTTHUMG00000035479.1; LINC01037;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.5719 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01036:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PLA2G4A-2:1
3.1 lnc-PLA2G4A-2:1
4.0 LINC01037:1
4.1 LINC01037:1
5.0 LINC01037:1
5.1 LINC01036:17
5.2 LINC01036:26